STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maged2Melanoma-associated antigen D2. (633 aa)    
Predicted Functional Partners:
Nsmce1
Non-structural maintenance of chromosomes element 1 homolog.
   
 0.755
Smc5
Structural maintenance of chromosomes protein 5 isoform X1.
   
 0.731
Smc6
Structural maintenance of chromosomes protein 6 isoform X1.
   
 0.721
Nsmce2
E3 SUMO-protein ligase NSE2.
    
 0.714
Nsmce4a
Non-structural maintenance of chromosomes element 4 homolog A.
   
 0.693
Trp53
Cellular tumor antigen p53 isoform X1.
    
 0.693
Eid3
EP300-interacting inhibitor of differentiation 3.
   
 0.693
E2f1
LOW QUALITY PROTEIN: transcription factor E2F1.
    
 
 0.495
Tex15
Testis-expressed sequence 15 protein.
  
 
 
 0.483
Smc3
Structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6).
    
 0.432
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.