STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fam102bProtein FAM102B. (348 aa)    
Predicted Functional Partners:
Sec61g
Protein transport protein SEC61 subunit gamma and related proteins.
   
 
 0.635
Gpsm2
G-protein-signaling modulator 2 isoform X1.
    
 
 0.556
Pi4kb
Phosphatidylinositol 4-kinase beta isoform X1.
   
 0.542
Pcp2
Purkinje cell protein 2 homolog isoform X1.
    
 
 0.481
Tlnrd1
Mesoderm development candidate 1-like.
    
 0.479
Tln2
Talin-2 isoform X1.
    
 0.479
Tln1
Talin-1 isoform X1.
    
 0.479
Pi4ka
Phosphatidylinositol 4-kinase alpha isoform X1.
   
 0.467
Ankrd23
Ankyrin repeat domain-containing protein 23 isoform X1.
    
 
 0.454
Tmem37
Voltage-dependent calcium channel gamma-like subunit.
      
 0.445
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.