STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tgm4Transglutaminase 4 (prostate). (699 aa)    
Predicted Functional Partners:
Zdhhc3
Zinc finger, DHHC domain containing 3.
      
 0.779
Akr1b1
Aldehyde reductase.
      
 0.676
Tmem42
Transmembrane protein 42.
      
 0.673
Tmem176a
LOW QUALITY PROTEIN: transmembrane protein 176A.
   
  
 0.668
Kcns1
Potassium voltage-gated channel delayed-rectifier subfamily S member 1.
      
 0.653
F13b
Coagulation factor XIII B polypeptide.
    
 0.634
ENSCCNP00000006317
annotation not available
      
 0.608
Wfdc5
WAP four-disulfide core domain 5.
   
  
 0.581
Acpp
Prostatic acid phosphatase.
      
 0.548
Aoc1
Amiloride-sensitive amine oxidase [copper-containing].
      
 0.521
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.