STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rnf215RING finger protein 215 isoform X1. (380 aa)    
Predicted Functional Partners:
Uba52
Ubiquitin-60S ribosomal protein L40 isoform X1.
    
 0.643
Rspo1
R-spondin 1.
   
 0.599
Lgr4
Leucine-rich repeat-containing G-protein coupled receptor 4 isoform X1.
    
 0.551
Lgr5
Leucine-rich repeat-containing G-protein coupled receptor 5 isoform X1.
    
 0.551
Bag6
Large proline-rich protein BAG6 isoform X1.
   
 
 0.534
Rspo2
R-spondin-2 isoform X1.
   
 0.516
Ubox5
RING finger protein 37 isoform X1.
     
 0.507
Rspo3
R-spondin 3.
   
 0.506
ENSCCNP00000008906
annotation not available
    
 0.489
Rps27a
Ubiquitin-small subunit ribosomal protein S27Ae.
    
 0.489
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.