STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000020567AT-rich interactive domain-containing protein 5B isoform X1. (252 aa)    
Predicted Functional Partners:
Arid5a
AT-rich interactive domain-containing protein 5A isoform X1.
 
    
 0.900
Cul7
Cullin-7 isoform X1.
   
  
 0.584
4921524J17Rik
UPF0547 protein C16orf87 homolog.
    
 
 0.566
Smarcb1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.
    
 
 0.562
Phf8
[histone H3]-dimethyl-L-lysine9 demethylase.
     
 0.550
Kdm7a
[histone H3]-dimethyl-L-lysine9 demethylase.
     
 0.550
Phf2
Lysine-specific demethylase PHF2 isoform X1.
     
 0.550
Pbrm1
Protein polybromo-1 isoform X1.
   
 
 0.544
ENSCCNP00000013611
annotation not available
     
 0.533
Arl10
ADP-ribosylation factor-like protein 10.
   
  
 0.492
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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