STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000020725Interferon-induced protein with tetratricopeptide repeats 5. (484 aa)    
Predicted Functional Partners:
Leo1
RNA polymerase-associated protein LEO1 isoform X1.
    
 0.785
ENSCCNP00000020720
annotation not available
  
 
0.664
Usp18
Ubiquitin carboxyl-terminal hydrolase 18/41.
   
 0.625
Isg15
Ubiquitin cross-reactive protein.
   
 0.610
Ddx58
Probable ATP-dependent RNA helicase DDX58.
   
 0.601
Ifih1
Interferon-induced helicase C domain-containing protein 1.
   
 0.592
Tep1
LOW QUALITY PROTEIN: telomerase protein component 1.
   
 0.579
Bbs7
Bardet-Biedl syndrome 7 protein-like.
   
 0.563
Ttc8
Tetratricopeptide repeat protein 8 isoform X1.
    
 0.525
ENSCCNP00000029445
Parafibromin.
    
 0.519
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.