STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Eif6Eukaryotic translation initiation factor 6. (245 aa)    
Predicted Functional Partners:
Rpl18a
LOW QUALITY PROTEIN: 60S ribosomal protein L18a.
  
 
 0.995
Rsl24d1
Probable ribosome biogenesis protein RLP24.
   
 
 0.992
ENSCCNP00000031473
annotation not available
   
 
 0.992
Rpl24
Large subunit ribosomal protein L24e.
   
 
 0.990
Rpl5
60S ribosomal protein L5 isoform X1.
  
 
 0.990
Nmd3
60S ribosomal export protein NMD3 isoform X1.
   
 
 0.988
Rpl4
Large subunit ribosomal protein L4e.
   
 
 0.988
Wdr12
Ribosome biogenesis protein WDR12.
   
 
 0.983
Gnl2
Nucleolar GTP-binding protein 2 isoform X1.
   
 
 0.983
Rpl19
Large subunit ribosomal protein L19e.
  
 
 0.982
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.