STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Erg28Probable ergosterol biosynthetic protein 28. (151 aa)    
Predicted Functional Partners:
ENSCCNP00000032875
Lanosterol 14-alpha demethylase.
   
 
 0.986
Hsd17b7
17beta-estradiol 17-dehydrogenase / 3beta-hydroxysteroid 3-dehydrogenase.
   
 
 0.982
Sc5d
Delta7-sterol 5-desaturase.
   
 
 0.981
Lss
Lanosterol synthase isoform X1.
   
 
 0.978
Sigmar1
Sigma non-opioid intracellular receptor 1 isoform X1.
   
 
 0.978
Fdft1
Farnesyl-diphosphate farnesyltransferase.
   
 
 0.876
ENSCCNP00000012717
annotation not available
   
 
 0.876
Msmo1
Methylsterol monooxygenase 1.
   
 
 0.860
Ch25h
Cholesterol 25-hydroxylase.
   
 
 0.860
Gm12248
Fatty acid hydroxylase domain-containing protein 2.
   
 
 0.860
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.