STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HnrnpkHeterogeneous nuclear ribonucleoprotein K isoform X1. (464 aa)    
Predicted Functional Partners:
Hnrnpu
Heterogeneous nuclear ribonucleoprotein U.
   
 0.976
Pcbp1
Poly(rC)-binding protein 1.
   
0.969
Gm5269
LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like.
   
 0.965
Hnrnpa1
Heterogeneous nuclear ribonucleoprotein A1 isoform X1.
   
 0.965
Hnrnpc
Heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1.
   
 0.960
ENSCCNP00000016320
LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A3-like.
   
 0.958
Rbmxl2
RNA-binding motif protein, X-linked-like-2.
   
 0.945
Rbmx
Heterogeneous nuclear ribonucleoprotein G.
   
 0.945
Hnrnpl
Heterogeneous nuclear ribonucleoprotein L.
   
 0.769
Ptbp1
Polypyrimidine tract-binding protein 1 isoform X1.
   
 0.747
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.