STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000021092annotation not available (131 aa)    
Predicted Functional Partners:
ENSCCNP00000006766
annotation not available
   
 0.973
Fau
Ubiquitin-like protein fubi and ribosomal protein S30.
   
 0.973
ENSCCNP00000026563
annotation not available
   
 0.973
Rpl5
60S ribosomal protein L5 isoform X1.
  
 0.971
Rpl14
Large subunit ribosomal protein L14e.
  
 0.968
Rpl8
Large subunit ribosomal protein L8e.
  
 0.965
Rpl24
Large subunit ribosomal protein L24e.
   
 0.964
Rpl6
60S ribosomal protein L6 isoform X1.
  
 0.963
Rpl19
Large subunit ribosomal protein L19e.
  
 0.962
Rpl32
Large subunit ribosomal protein L32e.
  
 0.962
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.