STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pcgf5Polycomb group RING finger protein 5 isoform X1. (298 aa)    
Predicted Functional Partners:
Rnf2
E3 ubiquitin-protein ligase RNF1/2.
   
 0.941
Ring1
E3 ubiquitin-protein ligase RING1 isoform X1.
   
 0.931
Rybp
RING1 and YY1-binding protein.
    
 0.918
Fbrs
Probable fibrosin-1.
    
 0.889
Yaf2
YY1-associated factor 2 isoform X1.
    
 0.872
Csnk2a2
Casein kinase II subunit alpha.
    
 0.747
ENSCCNP00000005328
annotation not available
    
 0.723
Ly6g5b
Lymphocyte antigen 6 complex locus protein G5b.
    
 0.716
Csnk2b
Casein kinase II subunit beta.
    
 0.716
Auts2
Autism susceptibility gene 2 protein isoform X1.
    
 0.716
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.