STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dennd4bDENN domain-containing protein 4B isoform X1. (1508 aa)    
Predicted Functional Partners:
ENSCCNP00000002090
annotation not available
    
 0.629
Dennd1c
DENN/MADD domain containing 1C.
    
 
0.602
Dennd5b
DENN domain-containing protein 5B isoform X1.
    
 
0.537
Avl9
Late secretory pathway protein AVL9 homolog isoform X1.
      
 0.526
Dennd1a
LOW QUALITY PROTEIN: DENN domain-containing protein 1A.
   
 
 0.473
Fbxl4
F-box and leucine-rich repeat protein 4.
   
  
 0.460
Ric1
RAB6A-GEF complex partner protein 1 isoform X1.
      
 0.453
ENSCCNP00000007739
annotation not available
    
 0.452
Rab8a
Ras-related protein Rab-8A.
    
 0.452
Rab8b
Ras-related protein Rab-8B.
    
 0.452
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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