STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fkbp11Peptidyl-prolyl cis-trans isomerase FKBP11. (199 aa)    
Predicted Functional Partners:
Cd9
CD9 antigen.
      
 0.569
Hspa5
Endoplasmic reticulum chaperone BiP.
   
 0.470
Hyou1
Hypoxia up-regulated protein 1 isoform X1.
   
 0.466
Fkbp6
FK506 binding protein 6.
  
   
 0.458
Ryr3
Ryanodine receptor 3.
    
 0.449
Ryr2
LOW QUALITY PROTEIN: ryanodine receptor 2.
    
 0.449
Ryr1
LOW QUALITY PROTEIN: ryanodine receptor 1.
    
 0.449
Hsp90b1
Heat shock protein 90kDa beta.
   
 0.437
Ppib
Peptidyl-prolyl cis-trans isomerase B (cyclophilin B).
   
 0.433
Ppic
Peptidylprolyl isomerase C.
   
 0.419
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.