STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccnt2Cyclin-T2 isoform X1. (733 aa)    
Predicted Functional Partners:
Cdk9
LOW QUALITY PROTEIN: cyclin-dependent kinase 9.
   
 0.997
Ccnt1
Cyclin-T1.
    
0.958
Aff4
AF4/FMR2 family member 4.
   
 0.954
Aff1
AF4/FMR2 family member 1 isoform X1.
   
 0.863
Nelfe
Negative elongation factor E isoform X1.
    
 0.809
Cdk12
Cyclin-dependent kinase 12 isoform X1.
   
 0.801
Cdk13
Cyclin-dependent kinase 13 isoform X1.
   
 0.801
Mllt1
YEATS domain-containing protein 1/3.
   
 0.782
Supt5
Transcription elongation factor SPT5.
   
 0.775
Ell3
RNA polymerase II elongation factor ELL3.
    
 0.751
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.