STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Clint1Clathrin interactor 1 isoform X1. (620 aa)    
Predicted Functional Partners:
Gak
Cyclin-G-associated kinase isoform X1.
    
 0.978
Vti1b
Vesicle transport through interaction with t-SNAREs homolog 1B.
    
 
 0.945
Vti1a
Vesicle transport through interaction with t-SNAREs homolog 1A isoform X1.
    
 
 0.756
Pum1
Pumilio homolog 1 isoform X1.
   
 
 0.700
Sh3d19
SH3 domain-containing protein 19.
     
 0.672
Ap1b1
AP-1 complex subunit beta-1 isoform X1.
    
 0.670
Dnajc6
Putative tyrosine-protein phosphatase auxilin isoform X1.
    
 0.636
Pum2
Pumilio RNA-binding family member 2.
   
 
 0.629
Snap91
Clathrin coat assembly protein AP180 isoform X1.
    
 0.627
Cltc
Clathrin heavy chain 1 isoform X1.
    
 0.620
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.