STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hmgxb4HMG domain-containing protein 4 isoform X1. (637 aa)    
Predicted Functional Partners:
ENSCCNP00000021929
Target of Myb protein 1-like isoform X1.
      
 0.576
Ccdc30
Coiled-coil domain-containing protein 30.
      
 0.571
Foxred2
FAD-dependent oxidoreductase domain-containing protein 2.
      
 0.570
Ccar1
Cell division cycle and apoptosis regulator 1.
      
 0.567
Rasd2
GTP-binding protein Rhes.
      
 0.557
Mcm5
DNA replication licensing factor MCM5.
      
 0.532
Megf6
Multiple epidermal growth factor-like domains protein 6.
      
 0.521
Tmem8b
Transmembrane protein 8B isoform X1.
      
 0.480
Ints8
Integrator complex subunit 8.
      
 0.447
0610010K14Rik
RIKEN cDNA 0610010K14 gene.
    
 
 0.432
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.