STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pcbp2Poly(rC)-binding protein 2 isoform X1. (362 aa)    
Predicted Functional Partners:
Pcbp1
Poly(rC)-binding protein 1.
  
0.966
Srsf3
Splicing factor, arginine/serine-rich 3.
   
 0.687
Hnrnpl
Heterogeneous nuclear ribonucleoprotein L.
   
 0.564
ENSCCNP00000016320
LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A3-like.
   
 0.557
ENSCCNP00000032025
annotation not available
   
 0.557
Hnrnpd
LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein D0-like.
   
 0.556
Ncbp1
Nuclear cap-binding protein subunit 1.
   
 0.552
Ncbp2
Nuclear cap-binding protein subunit 2.
    
 0.548
Ptbp1
Polypyrimidine tract-binding protein 1 isoform X1.
   
 0.532
Prpf8
Pre-mRNA-processing-splicing factor 8.
   
   0.520
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.