STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ric1RAB6A-GEF complex partner protein 1 isoform X1. (1311 aa)    
Predicted Functional Partners:
Rgp1
RAB6A-GEF complex partner protein 2 isoform X1.
    
 0.968
Rab6a
Ras-related protein Rab-6A isoform X1.
    
 0.854
Rab6b
Ras-related protein Rab-6B isoform X1.
    
 0.854
Cog8
Conserved oligomeric Golgi complex subunit 8.
   
 0.840
Arfrp1
ADP-ribosylation factor-related protein 1 isoform X1.
    
 0.824
Rab34
Ras-related protein Rab-34 isoform X1.
    
 0.781
Rab36
Ras-related protein Rab-36.
    
 0.781
Rab33a
Ras-related protein Rab-33A.
    
 0.767
Cog3
LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 3.
     
 0.757
ENSCCNP00000002187
annotation not available
    
 0.751
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.