STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000022215Trafficking protein particle complex 6A. (205 aa)    
Predicted Functional Partners:
ENSCCNP00000001880
Trafficking protein particle complex 1.
   
 0.979
Trappc4
Trafficking protein particle complex subunit 4.
   
 0.971
Trappc2
Trafficking protein particle complex 2.
   
 0.969
Trappc5
Trafficking protein particle complex subunit 5.
    
 0.966
Trappc8
Trafficking protein particle complex subunit 8.
   
 0.956
ENSCCNP00000006139
Trafficking protein particle complex subunit 3.
   
 0.945
ENSCCNP00000024222
annotation not available
   
 0.945
Trappc2l
Trafficking protein particle complex subunit 2-like protein isoform X1.
   
 0.939
Trappc10
Trafficking protein particle complex subunit 10.
    
 0.937
Trappc11
Trafficking protein particle complex subunit 11 isoform X1.
   
 0.907
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.