STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmem86bAlkenylglycerophosphocholine hydrolase. (225 aa)    
Predicted Functional Partners:
Lpcat4
Lysophospholipid acyltransferase LPCAT4.
     
 0.907
ENSCCNP00000028036
Ectonucleotide pyrophosphatase/phosphodiesterase family member 2.
   
 
 0.905
Pla2g12b
Group XIIB secretory phospholipase A2-like protein isoform X1.
   
 
  0.904
Pla2g6
85/88 kDa calcium-independent phospholipase A2 isoform X1.
     
 0.902
Plb1
Phospholipase B1, membrane-associated.
   
 
  0.902
Pla2g1b
Secretory phospholipase A2.
     
 0.902
ENSCCNP00000026835
HRAS-like suppressor 2.
   
 
  0.901
ENSCCNP00000027076
HRAS-like suppressor 3.
   
 
  0.901
ENSCCNP00000027081
HRAS-like suppressor 2 isoform X1.
   
 
  0.901
Pla2g2c
Putative inactive group IIC secretory phospholipase A2.
     
  0.900
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.