STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Minar1UPF0258 protein KIAA1024 homolog isoform X1. (915 aa)    
Predicted Functional Partners:
Dhx38
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16.
      
 0.585
ENSCCNP00000013385
annotation not available
      
 0.570
Ppic
Peptidylprolyl isomerase C.
      
 0.569
Ppp3r1
Serine/threonine-protein phosphatase 2B regulatory subunit.
      
 0.447
Slc8a2
Solute carrier family 8 (sodium/calcium exchanger).
      
 0.420
Nom1
Nucleolar protein with MIF4G domain 1.
      
 0.410
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.