STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000022793Skin secretory protein xP2-like. (135 aa)    
Predicted Functional Partners:
Sec61g
Protein transport protein SEC61 subunit gamma and related proteins.
   
 
 0.819
Sec63
Translocation protein SEC63 homolog isoform X1.
    
 
 0.688
ENSCCNP00000012877
Translocation protein SEC62.
    
 
 0.641
ENSCCNP00000012904
annotation not available
    
 
 0.641
Sec61a2
Protein transport protein Sec61 subunit alpha isoform X1.
    
 
 0.630
Sec61a1
Protein transport protein SEC61 subunit alpha.
    
 
 0.630
Sec61b
Protein transport protein SEC61 subunit beta.
    
 
 0.563
ENSCCNP00000016615
annotation not available
    
 
 0.563
ENSCCNP00000004687
annotation not available
 
      0.531
Cab39l
Calcium-binding protein 39-like.
   
 0.468
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.