STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Parp9Poly [ADP-ribose] polymerase 9. (829 aa)    
Predicted Functional Partners:
Dtx3l
E3 ubiquitin-protein ligase DTX3L isoform X1.
 
 
 0.985
Ifih1
Interferon-induced helicase C domain-containing protein 1.
   
 
 0.847
Stat1
Signal transducer and activator of transcription 1-alpha/beta.
   
 
 0.781
Ddx58
Probable ATP-dependent RNA helicase DDX58.
   
 
 0.778
Ifi35
Interferon-induced 35 kDa protein isoform X1.
   
  
 0.772
ENSCCNP00000006556
LOW QUALITY PROTEIN: interferon-induced protein 44-like.
   
  
 0.766
Epsti1
Epithelial-stromal interaction protein 1.
   
  
 0.763
Samd9l
Sterile alpha motif domain-containing protein 9-like.
   
 0.751
ENSCCNP00000005188
Poly [ADP-ribose] polymerase 10/14/15.
  
 
0.704
Rtp4
Receptor-transporting protein 4.
   
  
 0.620
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.