STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Efcab15EF-hand calcium binding domain 15. (372 aa)    
Predicted Functional Partners:
ENSCCNP00000033166
Peripheral plasma membrane protein CASK-like.
    
 0.592
ENSCCNP00000033170
annotation not available
    
 0.592
Cask
Calcium/calmodulin-dependent serine protein kinase.
    
 0.592
Xpc
DNA repair protein complementing XP-C cells isoform X1.
    
 0.464
ENSCCNP00000032423
Serine/threonine-protein kinase DCLK1-like.
   
 0.449
ENSCCNP00000008052
Serine/threonine-protein kinase DCLK1.
   
 0.437
ENSCCNP00000032429
annotation not available
   
 0.437
Dnaaf3
Dynein, axonemal assembly factor 3.
   
 0.428
Tnni3
Troponin I, cardiac muscle.
   
 0.428
Tnni1
Troponin I, slow skeletal muscle-like.
   
 0.428
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.