STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sv2aMFS transporter, VNT family, synaptic vesicle glycoprotein 2. (742 aa)    
Predicted Functional Partners:
Sv2b
MFS transporter, VNT family, synaptic vesicle glycoprotein 2.
  
  
 
0.901
Sv2c
MFS transporter, VNT family, synaptic vesicle glycoprotein 2.
  
  
 
0.900
Lamc2
Laminin subunit gamma-2.
     
 0.747
Lamc1
Laminin subunit gamma-1.
     
 0.702
Lamc3
Laminin subunit gamma-3.
     
 0.702
Lamb2
Laminin subunit beta-2.
     
 0.691
Lama3
Laminin subunit alpha-3.
     
 0.690
Lamb3
Laminin subunit beta-3.
     
 0.682
Syp
Synaptophysin.
   
  
 0.682
Lama4
Laminin subunit alpha-4.
     
 0.681
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.