STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000023085annotation not available (126 aa)    
Predicted Functional Partners:
Leo1
RNA polymerase-associated protein LEO1 isoform X1.
    
 0.709
ENSCCNP00000023058
Histone H2A type 1-like.
 
 0.660
ENSCCNP00000006448
Histone H2A type 1-J.
 
 0.642
ENSCCNP00000022988
Histone H2A type 2-C.
 
 0.641
ENSCCNP00000023151
Histone H2A type 1-C-like.
 
 0.640
ENSCCNP00000006509
Histone H2A type 1-D.
 
 0.637
H2ax
Histone H2AX.
 
 0.637
ENSCCNP00000023024
annotation not available
 
 0.637
ENSCCNP00000023069
annotation not available
 
 0.637
H2aw
Histone H2A type 3.
 
 0.636
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.