STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000023205Histone H3.1-like. (136 aa)    
Predicted Functional Partners:
ENSCCNP00000006463
Histone H4.
 
 
 0.940
Kdm6b
Lysine-specific demethylase 6B isoform X1.
   
 0.855
ENSCCNP00000006455
Histone H3.
  
0.842
ENSCCNP00000002609
Uncharacterized protein LOC109683645.
   
 0.798
ENSCCNP00000010304
Histone demethylase UTY-like.
   
 0.798
Uty
Ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome.
   
 0.798
Kdm6a
Lysine-specific demethylase 6A isoform X1.
   
 0.798
Carm1
Histone-arginine methyltransferase CARM1 isoform X1.
   
 0.751
Ezh2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
   
 0.750
Chd4
Chromodomain-helicase-DNA-binding protein 4 isoform X1.
    
 0.750
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.