STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PdgfrlPlatelet-derived growth factor receptor-like protein. (375 aa)    
Predicted Functional Partners:
Vegfa
Vascular endothelial growth factor A.
    
 0.763
Vegfc
Vascular endothelial growth factor C/D.
   
 0.671
Pdgfb
Platelet-derived growth factor subunit B isoform X1.
   
 0.655
Grb2
Growth factor receptor-bound protein 2 isoform X1.
   
 0.649
ENSCCNP00000001942
Tumor suppressor candidate 3-like.
      
 0.621
Nrp2
Neuropilin-2 isoform X1.
     
 0.617
Pdgfa
Platelet-derived growth factor subunit A isoform X1.
    
 0.611
Nrp1
Neuropilin-1 isoform X1.
    
 0.610
Rasa1
Ras GTPase-activating protein 1.
    
 0.588
Pik3r3
Phosphoinositide-3-kinase regulatory subunit alpha/beta/delta.
    
 0.565
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.