STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7LOW QUALITY PROTEIN: complement component C7. (844 aa)    
Predicted Functional Partners:
ENSCCNP00000002911
Complement component C6-like.
   
0.924
C9
LOW QUALITY PROTEIN: complement component C9.
   
0.868
C8b
Complement component C8 beta chain isoform X1.
   
 
0.852
Hc
Complement component 5.
   
 0.841
ENSCCNP00000014618
Complement C5-like.
   
 0.841
ENSCCNP00000014636
annotation not available
   
 0.841
Vtn
Vitronectin.
   
 
 0.629
Clu
Clusterin.
   
 0.544
C8a
Complement component 8 subunit alpha.
   
0.528
Btd
Biotinidase.
   
  
 0.526
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.