STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000023629Fucose-1-phosphate guanylyltransferase-like. (142 aa)    
Predicted Functional Partners:
Fpgt
Fucose-1-phosphate guanylyltransferase.
 
     0.922
Mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.586
Fcsk
Fucose kinase.
      
 0.469
Tradd
Tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X1.
   
 0.465
Cd247
CD247 antigen.
   
 0.458
ENSCCNP00000000015
Baculoviral IAP repeat-containing protein 6-like isoform X1.
   
 0.432
Birc6
Baculoviral IAP repeat-containing protein 6 isoform X1.
   
 0.432
Ube2v1
Ubiquitin-conjugating enzyme E2 variant 1 isoform X1.
    
 0.432
ENSCCNP00000026510
annotation not available
    
 0.432
Nbr1
Next to BRCA1 gene 1 protein isoform X1.
   
 0.424
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.