STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Myl1Myosin light chain 1/3, skeletal muscle isoform. (92 aa)    
Predicted Functional Partners:
Mylpf
Myosin regulatory light chain 2, skeletal muscle isoform.
   
 0.940
Neb
LOW QUALITY PROTEIN: nebulin.
   
 
 0.892
Tnnc2
Troponin C, skeletal muscle.
  
0.849
Tnni2
Troponin I, fast skeletal muscle.
   
 0.847
Tnni3
Troponin I, cardiac muscle.
   
 0.843
Tnni1
Troponin I, slow skeletal muscle-like.
   
 0.824
Myh13
Myosin heavy chain 1/2/3/4/8/13/7B/15.
   
 0.819
Tnnt2
Troponin T, cardiac muscle.
   
 0.775
Smim20
Small integral membrane protein 20.
   
 0.775
Tnnt1
Troponin T, slow skeletal muscle isoform X1.
   
 0.775
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.