STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rps27aUbiquitin-small subunit ribosomal protein S27Ae. (156 aa)    
Predicted Functional Partners:
Fau
Ubiquitin-like protein fubi and ribosomal protein S30.
   
0.999
ENSCCNP00000006766
annotation not available
   
 0.998
Ube2v1
Ubiquitin-conjugating enzyme E2 variant 1 isoform X1.
   
 0.998
Uba52
Ubiquitin-60S ribosomal protein L40 isoform X1.
  
0.998
ENSCCNP00000026510
annotation not available
   
 0.998
ENSCCNP00000026563
annotation not available
   
 0.998
Nbr1
Next to BRCA1 gene 1 protein isoform X1.
   
 0.994
Rps15
Small subunit ribosomal protein S15e.
   
 0.990
Rps11
Small subunit ribosomal protein S11e.
   
 0.989
Rps5
Small subunit ribosomal protein S5e.
   
 0.987
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.