STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000024294annotation not available (78 aa)    
Predicted Functional Partners:
Ercc3
TFIIH basal transcription factor complex helicase XPB subunit isoform X1.
   
 0.957
Gtf2h1
Transcription initiation factor TFIIH subunit 1.
    
 0.950
Gtf2h4
Transcription initiation factor TFIIH subunit 4.
    
 0.949
Gtf2h3
General transcription factor IIH subunit 3 isoform X1.
    
 0.946
Ercc2
TFIIH basal transcription factor complex helicase XPD subunit.
    
 0.932
Gtf2h2
General transcription factor IIH subunit 2-like protein isoform X1.
    
 0.913
Cdk7
Cyclin-dependent kinase 7-like isoform X1.
    
 0.902
Xpa
DNA repair protein complementing XP-A cells isoform X1.
    
 0.814
Mnat1
Menage a trois 1.
    
 0.808
ENSCCNP00000015170
annotation not available
    
 0.791
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.