Usp39 protein (Castor canadensis) - STRING interaction network

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Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

Usp39

U4/U6.U5 tri-snRNP-associated protein 2. (152 aa)

Predicted Functional Partners:

ENSCCNP00000007561

0.901

Sart1

0.875

Snrnp27

0.854

Prpf8

0.852

Prpf31

0.838

Ddx23

0.825

Eftud2

0.820

ENSCCNP00000029765

0.820

Prpf3

0.769

Prpf4

0.755

Your Current Organism:

Castor canadensis

NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ddx23	ENSCCNP00000007561	ENSCCNP00000004257	ENSCCNP00000007561	LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX23.	U4/U6.U5 tri-snRNP-associated protein 2-like.	0.890
Ddx23	ENSCCNP00000029765	ENSCCNP00000004257	ENSCCNP00000029765	LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX23.	116 kDa U5 small nuclear ribonucleoprotein component-like.	0.959
Ddx23	Eftud2	ENSCCNP00000004257	ENSCCNP00000022531	LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX23.	116 kDa U5 small nuclear ribonucleoprotein component.	0.959
Ddx23	Prpf3	ENSCCNP00000004257	ENSCCNP00000011413	LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX23.	U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1.	0.945
Ddx23	Prpf31	ENSCCNP00000004257	ENSCCNP00000019978	LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX23.	LOW QUALITY PROTEIN: U4/U6 small nuclear ribonucleoprotein Prp31.	0.947
Ddx23	Prpf4	ENSCCNP00000004257	ENSCCNP00000022278	LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX23.	U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1.	0.916
Ddx23	Prpf8	ENSCCNP00000004257	ENSCCNP00000031379	LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX23.	Pre-mRNA-processing-splicing factor 8.	0.995
Ddx23	Sart1	ENSCCNP00000004257	ENSCCNP00000025133	LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX23.	U4/U6.U5 tri-snRNP-associated protein 1 isoform X1.	0.959
Ddx23	Snrnp27	ENSCCNP00000004257	ENSCCNP00000021307	LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX23.	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein.	0.641
Ddx23	Usp39	ENSCCNP00000004257	ENSCCNP00000024306	LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX23.	U4/U6.U5 tri-snRNP-associated protein 2.	0.825
ENSCCNP00000007561	Ddx23	ENSCCNP00000007561	ENSCCNP00000004257	U4/U6.U5 tri-snRNP-associated protein 2-like.	LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX23.	0.890
ENSCCNP00000007561	ENSCCNP00000029765	ENSCCNP00000007561	ENSCCNP00000029765	U4/U6.U5 tri-snRNP-associated protein 2-like.	116 kDa U5 small nuclear ribonucleoprotein component-like.	0.874
ENSCCNP00000007561	Eftud2	ENSCCNP00000007561	ENSCCNP00000022531	U4/U6.U5 tri-snRNP-associated protein 2-like.	116 kDa U5 small nuclear ribonucleoprotein component.	0.874
ENSCCNP00000007561	Prpf3	ENSCCNP00000007561	ENSCCNP00000011413	U4/U6.U5 tri-snRNP-associated protein 2-like.	U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1.	0.840
ENSCCNP00000007561	Prpf31	ENSCCNP00000007561	ENSCCNP00000019978	U4/U6.U5 tri-snRNP-associated protein 2-like.	LOW QUALITY PROTEIN: U4/U6 small nuclear ribonucleoprotein Prp31.	0.907
ENSCCNP00000007561	Prpf4	ENSCCNP00000007561	ENSCCNP00000022278	U4/U6.U5 tri-snRNP-associated protein 2-like.	U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1.	0.852
ENSCCNP00000007561	Prpf8	ENSCCNP00000007561	ENSCCNP00000031379	U4/U6.U5 tri-snRNP-associated protein 2-like.	Pre-mRNA-processing-splicing factor 8.	0.903
ENSCCNP00000007561	Sart1	ENSCCNP00000007561	ENSCCNP00000025133	U4/U6.U5 tri-snRNP-associated protein 2-like.	U4/U6.U5 tri-snRNP-associated protein 1 isoform X1.	0.905
ENSCCNP00000007561	Snrnp27	ENSCCNP00000007561	ENSCCNP00000021307	U4/U6.U5 tri-snRNP-associated protein 2-like.	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein.	0.942
ENSCCNP00000007561	Usp39	ENSCCNP00000007561	ENSCCNP00000024306	U4/U6.U5 tri-snRNP-associated protein 2-like.	U4/U6.U5 tri-snRNP-associated protein 2.	0.901