STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000024550annotation not available (115 aa)    
Predicted Functional Partners:
Sympk
LOW QUALITY PROTEIN: symplekin.
    
 
 0.823
ENSCCNP00000033411
annotation not available
    
 
 0.738
Gtf2b
Transcription initiation factor TFIIB.
   
 
 0.571
Pomp
Proteasome maturation protein.
   
  
 0.478
1110004F10Rik
Small acidic protein.
   
    0.449
Supt5
Transcription elongation factor SPT5.
    
 
 0.410
ENSCCNP00000001691
annotation not available
   
    0.404
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.