STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ubac1Ubiquitin-associated domain-containing protein 1 isoform X1. (405 aa)    
Predicted Functional Partners:
Rnf123
Kip1 ubiquitination-promoting complex protein 1.
   
 
 0.922
Camsap1
Calmodulin-regulated spectrin-associated protein 1.
 
    
 0.639
Ubl7
Ubiquitin-like protein 7.
    
 0.570
H6pd
GDH/6PGL endoplasmic bifunctional protein isoform X1.
      
 0.545
Cd248
CD248 antigen, endosialin.
    
 
 0.543
Pmpca
Mitochondrial-processing peptidase subunit alpha.
   
  
 0.502
Surf6
Surfeit locus protein 6.
      
 0.472
Nub1
NEDD8 ultimate buster 1.
      
 0.470
Snapc4
SnRNA-activating protein complex subunit 4.
      
 0.452
Surf4
Surfeit locus protein 4 isoform X1.
      
 0.451
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.