STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbn1Fibrillin 1. (2875 aa)    
Predicted Functional Partners:
Lum
Lumican.
   
 0.929
Col5a2
Collagen type V/XI/XXIV/XXVII, alpha.
   
 0.886
Mfap2
Microfibrillar-associated protein 2 isoform X1.
   
 0.865
Eln
Elastin isoform X1.
   
 0.816
Col3a1
Collagen alpha-1(III) chain.
   
 0.815
Dcn
Decorin.
   
 0.801
Mfap5
Microfibrillar associated protein 5.
   
 0.796
Col1a1
Collagen alpha-1(I) chain.
   
 0.743
Adamts10
A disintegrin and metalloproteinase with thrombospondin motifs 10 isoform X1.
    
 0.736
Ltbp1
LOW QUALITY PROTEIN: latent-transforming growth factor beta-binding protein 1.
   
 
0.721
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.