STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fam209Protein FAM209A-like. (170 aa)    
Predicted Functional Partners:
Tulp2
Tubby-like protein 2.
   
  
 0.682
Pkdrej
Polycystic kidney disease and receptor for egg jelly-related protein.
   
  
 0.682
Tmco5
Transmembrane and coiled-coil domains 5.
      
 0.667
ENSCCNP00000025112
annotation not available
      
 0.605
Fam71d
Protein FAM71D.
      
 0.573
Plcz1
Phospholipase C, zeta 1.
      
 0.483
Ccdc130
Coiled-coil domain-containing protein 130.
      
 0.479
ENSCCNP00000030346
annotation not available
      
 0.465
Rtf1
RNA polymerase-associated protein RTF1 homolog.
   
  
 0.460
CUNH12orf40
Uncharacterized protein C12orf40 homolog.
      
 0.455
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.