STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Stoml2Stomatin-like protein 2, mitochondrial. (411 aa)    
Predicted Functional Partners:
Phb2
Prohibitin 2.
   
 
 0.854
Yme1l1
ATP-dependent zinc metalloprotease YME1L1.
   
 0.802
Cactin
Cactin.
 
 
  
 0.754
Phb
Prohibitin 1.
   
 
 0.751
ENSCCNP00000008075
annotation not available
   
 
 0.751
Parl
Presenilins-associated rhomboid-like protein, mitochondrial.
   
 0.737
Mrps7
28S ribosomal protein S7, mitochondrial.
   
 
 0.705
Tufm
Elongation factor Tu, mitochondrial.
   
 
 0.633
Spg7
LOW QUALITY PROTEIN: paraplegin.
   
 0.633
Afg3l2
AFG3 family protein.
   
 0.632
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.