STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc22a20MFS transporter, OCT family, solute carrier family 22 (organic anion transporter), member 20. (556 aa)    
Predicted Functional Partners:
C2cd4d
C2 calcium-dependent domain-containing protein 4D.
   
 
 0.564
Agap3
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1/3/4/5/6/9/11.
      
 0.555
Rhod
Rho-related GTP-binding protein RhoD.
    
 
 0.550
Fmn1
Formin 1.
      
 0.550
Tle3
LOW QUALITY PROTEIN: transducin-like enhancer protein 3.
      
 0.550
Slc22a8
MFS transporter, OCT family, solute carrier family 22 (organic anion transporter), member 8.
  
   
0.534
Slc2a8
MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8.
  
 
 0.524
Ints1
LOW QUALITY PROTEIN: integrator complex subunit 1.
    
 0.488
Ints9
Integrator complex subunit 9.
    
 0.484
Ints11
Integrator complex subunit 11.
    
 0.470
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.