STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc25a38Solute carrier family 25 member 38 isoform X1. (306 aa)    
Predicted Functional Partners:
Ppox
Protoporphyrinogen oxidase.
      
 0.651
Uros
Uroporphyrinogen-III synthase isoform X1.
   
  
 0.616
Ccdc105
Coiled-coil domain-containing protein 105.
      
 0.577
Abcb6
ATP-binding cassette sub-family B member 6, mitochondrial isoform X1.
      
 0.575
Abcb7
ATP-binding cassette sub-family B member 7, mitochondrial isoform X1.
      
 0.567
Urod
Uroporphyrinogen decarboxylase.
      
 0.565
Sfxn1
Sideroflexin-1/3.
      
 0.550
Alas2
5-aminolevulinate synthase, erythroid-specific, mitochondrial.
      
 0.499
Clpx
ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial.
    
 
 0.495
Cpox
Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial.
      
 0.491
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.