STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000025719Protein HID1. (788 aa)    
Predicted Functional Partners:
Usp7
Ubiquitin carboxyl-terminal hydrolase 7 isoform X1.
    
 
 0.591
Usp40
Ubiquitin carboxyl-terminal hydrolase 40 isoform X1.
    
 
 0.591
Gle1
LOW QUALITY PROTEIN: nucleoporin GLE1.
   
 
 0.558
Nup155
LOW QUALITY PROTEIN: nuclear pore complex protein Nup155-like.
    
 
 0.530
Nup54
Nuclear pore complex protein Nup54.
    
 
 0.470
Nup133
Nuclear pore complex protein Nup133 isoform X1.
   
 
 0.450
Xrcc3
DNA repair protein XRCC3 isoform X1.
      
 0.445
ENSCCNP00000013388
Nuclear pore complex protein Nup155-like.
    
 
 0.435
Rad51
DNA repair protein RAD51 homolog 1.
      
 0.407
Pa2g4
Proliferation-associated protein 2G4.
    
   0.402
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.