STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pex5Peroxisomal biogenesis factor 5. (605 aa)    
Predicted Functional Partners:
Scp2
Non-specific lipid-transfer protein isoform X1.
   
 0.995
Pex7
Peroxisomal biogenesis factor 7 isoform X1.
    
 0.982
Pex14
Peroxisomal membrane protein PEX14.
   
 0.979
Nbr1
Next to BRCA1 gene 1 protein isoform X1.
    
 0.976
Pex13
Peroxisome biogenesis factor 13 isoform X1.
   
 0.969
Pex12
Peroxisome assembly protein 12.
   
 0.963
ENSCCNP00000016497
Hydroxysteroid dehydrogenase-like protein 2.
   
 0.946
ENSCCNP00000016506
LOW QUALITY PROTEIN: hydroxysteroid dehydrogenase-like protein 2.
   
 0.946
ENSCCNP00000024019
Hydroxysteroid dehydrogenase-like protein 2.
   
 0.946
Pex10
Peroxisome biogenesis factor 10.
    
 0.944
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.