STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000025925Testis-expressed sequence 13A protein-like. (381 aa)    
Predicted Functional Partners:
Utp4
U3 small nucleolar RNA-associated protein 4 homolog.
   
  
 0.465
ENSCCNP00000001880
Trafficking protein particle complex 1.
   
  
 0.432
Cnot7
CCR4-NOT transcription complex subunit 7 isoform X1.
    
   0.418
Spcs2
Signal peptidase complex subunit 2.
      
 0.405
Wdr36
U3 small nucleolar RNA-associated protein 21.
   
    0.404
Trappc4
Trafficking protein particle complex subunit 4.
      
 0.404
Orc2
Origin recognition complex subunit 2 isoform X1.
      
 0.403
Pwp2
PWP2 periodic tryptophan protein homolog (yeast).
   
    0.402
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.