STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Disp3LOW QUALITY PROTEIN: protein dispatched homolog 3. (1340 aa)    
Predicted Functional Partners:
ENSCCNP00000003071
Desert hedgehog protein.
   
 0.708
ENSCCNP00000006415
annotation not available
   
 0.708
Ihh
Indian hedgehog protein.
   
 0.708
Shh
Sonic hedgehog protein.
   
 0.708
Ubiad1
UbiA prenyltransferase domain-containing protein 1 isoform X1.
      
 0.599
Med22
LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 22.
      
 0.590
Fbxo2
F-box only protein 2 isoform X1.
   
  
 0.580
Kansl3
KAT8 regulatory NSL complex subunit 3 isoform X1.
      
 0.566
Grsf1
G-rich sequence factor 1 isoform X1.
      
 0.543
Nfu1
NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform X1.
    
 
 0.532
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.