STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000026006Heterogeneous nuclear ribonucleoprotein F-like. (414 aa)    
Predicted Functional Partners:
Hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 0.529
Srsf3
Splicing factor, arginine/serine-rich 3.
   
 0.520
Srsf1
Splicing factor, arginine/serine-rich 1.
   
 0.485
Hnrnpul1
Heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X1.
   
 0.481
Hnrnpu
Heterogeneous nuclear ribonucleoprotein U.
   
 0.475
Hnrnpl
Heterogeneous nuclear ribonucleoprotein L.
   
 0.468
Srsf2
LOW QUALITY PROTEIN: serine/arginine-rich splicing factor 2.
   
 0.458
Ncbp2
Nuclear cap-binding protein subunit 2.
   
 0.454
Hnrnpll
Heterogeneous nuclear ribonucleoprotein L-like.
   
 0.447
Hnrnpa2b1
Heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1.
   
 0.443
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.