STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000026165DNA excision repair protein ERCC-6-like 2. (344 aa)    
Predicted Functional Partners:
ENSCCNP00000000260
annotation not available
 
     0.916
ENSCCNP00000026225
DNA excision repair protein ERCC-6-like 2.
 
      0.900
Fancm
LOW QUALITY PROTEIN: Fanconi anemia group M protein.
   
 0.736
Pcna
Proliferating cell nuclear antigen.
  
 0.711
ENSCCNP00000012658
annotation not available
  
 
 0.667
Smarca1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1.
  
 
 0.666
Actr5
LOW QUALITY PROTEIN: actin-related protein 5.
    
 0.641
Exo1
Exonuclease 1.
   
 0.606
Rad18
E3 ubiquitin-protein ligase RAD18.
   
 0.605
ENSCCNP00000030193
annotation not available
   
 0.605
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.