STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Foxn3Forkhead box protein N3 isoform X1. (483 aa)    
Predicted Functional Partners:
Sin3a
LOW QUALITY PROTEIN: paired amphipathic helix protein Sin3a.
   
 0.654
ENSCCNP00000028401
annotation not available
    
 0.571
Men1
Menin isoform X1.
    
 0.504
Snw1
LOW QUALITY PROTEIN: SNW domain-containing protein 1.
    
 0.488
Sin3b
LOW QUALITY PROTEIN: paired amphipathic helix protein Sin3b.
   
 0.439
Cdh19
Cadherin 19, type 2.
     
 0.420
Sall3
Spalt like transcription factor 3.
    
 
 0.419
Perm1
PGC-1 and ERR-induced regulator in muscle protein 1 isoform X1.
    
 0.413
Yme1l1
ATP-dependent zinc metalloprotease YME1L1.
   
  
 0.408
Ep300
Histone acetyltransferase p300.
   
 0.405
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.