STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fam78aProtein FAM78A. (283 aa)    
Predicted Functional Partners:
Ap2a1
Adaptor-related protein complex 2, alpha 1 subunit.
     
 0.518
Wdr43
U3 small nucleolar RNA-associated protein 5.
   
 0.461
Gjd4
Gap junction protein, delta 4.
      
 0.452
Phyhip
Phytanoyl-CoA hydroxylase-interacting protein.
      
 0.445
Lims2
LIM and senescent cell antigen-like-containing domain protein 2 isoform X1.
      
 0.429
Nrxn3
Neurexin 3 isoform X1.
   
 0.419
ENSCCNP00000004540
Neurexin-1-like.
   
 0.419
ENSCCNP00000004560
Neurexin-1-like.
   
 0.419
Nrxn1
Neurexin-1 isoform X1.
   
 0.419
Nrxn2
Neurexin-2-beta isoform X1.
   
 0.419
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.