STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc7a4Solute carrier family 7 (cationic amino acid transporter), member 4. (635 aa)    
Predicted Functional Partners:
ENSCCNP00000029583
Solute carrier family 7 (L-type amino acid transporter), member 5.
  
 
 0.566
Thap7
THAP domain-containing protein 7.
    
 0.560
Aifm3
Apoptosis-inducing factor 3 isoform X1.
  
  
 0.474
Slc3a1
Neutral and basic amino acid transport protein rBAT.
   
 0.464
Pi4ka
Phosphatidylinositol 4-kinase alpha isoform X1.
      
 0.446
Sf3a1
Splicing factor 3A subunit 1.
    
 
 0.436
Slc15a4
Solute carrier family 15 (peptide/histidine transporter), member 3/4.
   
 
 0.418
Slc15a3
Solute carrier family 15 (peptide/histidine transporter), member 3/4.
   
 
 0.418
Serpind1
Heparin cofactor II.
   
 
 0.416
Slc3a2
4F2 cell-surface antigen heavy chain isoform X1.
   
 0.415
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.